BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B05SP1|AL430344
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1672 1703 0.0
3x_Contig7 161 2e-39
>3x_Contig1672
Length = 13609
Score = 1703 bits (857), Expect = 0.0
Identities = 887/895 (99%), Gaps = 3/895 (0%)
Strand = Plus / Minus
Query: 1 gatctccactgaagaagagagcygttctgacgtcaaagaactgtaaacataataagcact 60
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 4924 gatctccactgaagaagagagccgttctgacgtcaaagaac-gtaaacataataagcact 4866
Query: 61 gggaactcgataacaaaaccaaccggtagtwcatcaagccatggttcacccatgaagaat 120
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 4865 gggaactcgataacaaaaccaaccggtagtacatcaagccatggttcaccca-gaagaat 4807
Query: 121 caagactaaactcgacgtggagcgggctctacagaagagtcttgtgaaacaagttttctc 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4806 caagactaaactcgacgtggagcgggctctacagaagagtccagtgaaacaagttttctc 4747
Query: 181 tatcaaaagggcggtcacccaagaagaagggtgacgacgatccttcatcattcgcctttt 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4746 tatcaaaaggg-ggtcacccaagaagaagggtgacgacgatccttcatcattcgcctttt 4688
Query: 241 atgaagaatcggaagaagatcgggcagtggccttaatgagacacgtctcattgagaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4687 atgaagaatcggaagaagatcgggcagtggccttaatgagacacgtctcattgagaagga 4628
Query: 301 aagctgtwcacgacgagaacgagcaagaactagagaatatagatgagaataaacttgcga 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4627 aagctgtacacgacgagaacgagcaagaactagagaatatagatgagaataaacttgcga 4568
Query: 361 aagtacgagcacaggccactcaaaacagaggctctaacggaacagccatatcgccactgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4567 aagtacgagcacaggccactcaaaacagaggctctaacggaacagccatatcgccactgc 4508
Query: 421 aagacttggacatcgagttgtttcctggtacaatccaatatagaggttttagtcaagaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4507 aagacttggacatcgagttgtttcctggtacaatccaatatagaggttttagtcaagaac 4448
Query: 481 accatcttaatttacacttgaaccatacccgtaagctaccagagtacatcactccgccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4447 accatcttaatttacacttgaaccatacccgtaagctaccagagtacatcactccgccaa 4388
Query: 541 gaaacgccaaattaaaggatttctttgttcatgaaacacatgttaacgacaaggatcaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4387 gaaacgccaaattaaaggatttctttgttcatgaaacacatgttaacgacaaggatcaag 4328
Query: 601 tcttttcgaagaccacagatgatattaatgctaacaaagtggtgaggaaacttcaattct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4327 tcttttcgaagaccacagatgatattaatgctaacaaagtggtgaggaaacttcaattct 4268
Query: 661 gcatcgatgagaacagatgacaagattatgtaactccaagaacgtaaatatatatcaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4267 gcatcgatgagaacagatgacaagattatgtaactccaagaacgtaaatatatatcaact 4208
Query: 721 tgacatggaatggcatggatcctattgaaggtttgttttttcctttgaaaagaacctttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4207 tgacatggaatggcatggatcctattgaaggtttgttttttcctttgaaaagaacctttt 4148
Query: 781 ctttttcaggctggttgaaaaattttgagagctcatcgcatcgaatacataaatgaccag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4147 ctttttcaggctggttgaaaaattttgagagctcatcgcatcgaatacataaatgaccag 4088
Query: 841 agaacacgactctcagcggagatatttaacgggtcgtattgggttaattacacta 895
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4087 agaacacgactctcagcggagatatttaacgggtcgtattgggttaattacacta 4033
>3x_Contig7
Length = 746
Score = 161 bits (81), Expect = 2e-39
Identities = 121/133 (90%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 1 gatctccactgaagaagagagcygttctgacgtcaaagaactgtaaacataataagcact 60
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 122 gatctccactgaagaagagagccgttctgacgtcaaagaac-gtaaacataataagcact 180
Query: 61 gggaactcgataacaaaaccaaccggtagtwcatcaagccatggttcacccatgaagaat 120
|||||||||||||||||||||||| || | |||||| |||| ||||||||| || |||
Sbjct: 181 gggaactcgataacaaaaccaacctttattacatcaatccatttttcacccat-aataat 239
Query: 121 caagactaaactc 133
||| |||||||||
Sbjct: 240 caatactaaactc 252
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6980
Number of Sequences: 1807
Number of extensions: 6980
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 2
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)